So do a bunch of VAG cars from 2004 until now. There are hundreds of variations of the DQ250 with its various mechatronic and software combinations. Whilst the physical gearbox itself may be (almost) identical between different vehicles, this doesn't mean the box in totality is identical. This is true of the Mk2 to Mk3, and there's likely to be multiple revisions for each of the Mk2 and Mk3 as well.
I don't see this as a weakness. It's entirely possible that the Octavia behaves this way because it weighs more than the Golf, or is more likely to put more load on the gearbox... Or there may be no fundamental difference between vehicles and they just decided to tune it this way because Skoda is more risk-averse. Who knows.
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