I expect the vw shop gave a receipt with itemised report detailing the problem? If not, ensure you get it in writing from them. A picture or three would assist if at all possible. Seek an opinion from another Skoda dealer or even a VW dealer, possibly someone else independent (NRMA?) should this not work out. In other words, clear documentation ideally with physical evidence.
I have found Skoda dealers to be so-so on product knowledge, VW better so far due to greater experience with the identical mechanicals. Good luck with it.
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